function varargout = debn_generate_jarkus_data(varargin)
%DEBN_GENERATE_JARKUS_DATA  One line description goes here.
%
%   More detailed description goes here.
%
%   Syntax:
%   varargout = debn_generate_jarkus_data(varargin)
%
%   Input: For <keyword,value> pairs call debn_generate_jarkus_data() without arguments.
%   varargin  =
%
%   Output:
%   varargout =
%
%   Example
%   debn_generate_jarkus_data
%
%   See also

%% Copyright notice
%   --------------------------------------------------------------------
%   Copyright (C) 2012 Delft University of Technology
%       Kees den Heijer
%
%       C.denHeijer@TUDelft.nl
%
%       Faculty of Civil Engineering and Geosciences
%       P.O. Box 5048
%       2600 GA Delft
%       The Netherlands
%
%   This library is free software: you can redistribute it and/or modify
%   it under the terms of the GNU General Public License as published by
%   the Free Software Foundation, either version 3 of the License, or
%   (at your option) any later version.
%
%   This library is distributed in the hope that it will be useful,
%   but WITHOUT ANY WARRANTY; without even the implied warranty of
%   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
%   GNU General Public License for more details.
%
%   You should have received a copy of the GNU General Public License
%   along with this library.  If not, see <http://www.gnu.org/licenses/>.
%   --------------------------------------------------------------------

% This tool is part of <a href="http://www.OpenEarth.eu">OpenEarthTools</a>.
% OpenEarthTools is an online collaboration to share and manage data and
% programming tools in an open source, version controlled environment.
% Sign up to recieve regular updates of this function, and to contribute
% your own tools.

%% Version <http://svnbook.red-bean.com/en/1.5/svn.advanced.props.special.keywords.html>
% Created: 19 Sep 2012
% Created with Matlab version: 7.12.0.635 (R2011a)

% $Id$
% $Date$
% $Author$
% $Revision$
% $HeadURL$
% $Keywords: $

%%
OPT = struct(...
    'destdir', fullfile(fileparts(which(mfilename)), '..', 'netica'));

OPT = setproperty(OPT, varargin);

%%
tr = jarkus_transects(...
    'year', 2010,...
    'output', {'areacode', 'angle', 'id', 'time', 'x', 'y', 'cross_shore', 'altitude'});
%%
[curvatures radii relativeAngle distances] = jarkus_curvature(tr,...
    'verbose', true,...
    'method', 'circle',...
    'z', 5);
id = 1:length(radii);
radii(~isfinite(radii) | radii<=0) = 2e4;

netica_write_case_file(fullfile(OPT.destdir, 'jarkus_curvature_ori.cas'),...
    'id', tr.id(id),...
    'radius', radii,...
    'areacode', tr.areacode(id),...
    'theta', tr.angle(id));