! This is part of the netCDF package. ! Copyright 2006 University Corporation for Atmospheric Research/Unidata. ! See COPYRIGHT file for conditions of use. ! This program tests netCDF-4 parallel I/O and fill values from ! fortran. It creates a file like this: ! netcdf f90tst_parallel3 { ! dimensions: ! x = 16 ; ! y = 16 ; ! variables: ! byte byte(x, y) ; ! short short(x, y) ; ! int int(x, y) ; ! float float(x, y) ; ! double double(x, y) ; ! ubyte ubyte(x, y) ; ! ushort ushort(x, y) ; ! uint uint(x, y) ; ! $Id$ program f90tst_parallel3 use typeSizes use netcdf implicit none include 'mpif.h' ! This is the name of the data file we will create. character (len = *), parameter :: FILE_NAME = "f90tst_parallel3.nc" integer, parameter :: MAX_DIMS = 2 integer, parameter :: NX = 16, NY = 16 integer, parameter :: HALF_NX = NX/2, HALF_NY = NY/2 integer, parameter :: NUM_PROC = 4 integer, parameter :: NUM_VARS = 8 integer, parameter :: CACHE_SIZE = 4194304, CACHE_NELEMS = 1013 integer, parameter :: CACHE_PREEMPTION = 79 character (len = *), parameter :: var_name(NUM_VARS) = & (/ 'byte__', 'short_', 'int___', 'float_', 'double', 'ubyte_', 'ushort', 'uint__' /) integer :: ncid, varid(NUM_VARS), dimids(MAX_DIMS) integer :: var_type(NUM_VARS) = (/ nf90_byte, nf90_short, nf90_int, & nf90_float, nf90_double, nf90_ubyte, nf90_ushort, nf90_uint /) integer :: x_dimid, y_dimid integer :: byte_out(HALF_NY, HALF_NX), byte_in(HALF_NY, HALF_NX) integer :: short_out(HALF_NY, HALF_NX), short_in(HALF_NY, HALF_NX) integer :: int_out(HALF_NY, HALF_NX), int_in(HALF_NY, HALF_NX) real :: areal_out(HALF_NY, HALF_NX), areal_in(HALF_NY, HALF_NX) real :: double_out(HALF_NY, HALF_NX), double_in(HALF_NY, HALF_NX) integer :: ubyte_out(HALF_NY, HALF_NX), ubyte_in(HALF_NY, HALF_NX) integer :: ushort_out(HALF_NY, HALF_NX), ushort_in(HALF_NY, HALF_NX) integer (kind = EightByteInt) :: uint_out(HALF_NY, HALF_NX), uint_in(HALF_NY, HALF_NX) integer :: nvars, ngatts, ndims, unlimdimid, file_format integer :: x, y, v integer :: p, my_rank, ierr integer :: start(MAX_DIMS), count(MAX_DIMS) integer :: ret call MPI_Init(ierr) call MPI_Comm_rank(MPI_COMM_WORLD, my_rank, ierr) call MPI_Comm_size(MPI_COMM_WORLD, p, ierr) if (my_rank .eq. 0) then print *, ' ' print *, '*** Testing netCDF-4 parallel I/O with fill values.' endif ! There must be 4 procs for this test. if (p .ne. 4) then print *, 'Sorry, this test program must be run on four processors.' stop 1 endif ! Create some pretend data. do x = 1, HALF_NX do y = 1, HALF_NY byte_out(y, x) = my_rank * (-1) short_out(y, x) = my_rank * (-2) int_out(y, x) = my_rank * (-4) areal_out(y, x) = my_rank * 2.5 double_out(y, x) = my_rank * (-4.5) ubyte_out(y, x) = my_rank ushort_out(y, x) = my_rank * 2 uint_out(y, x) = my_rank * 4 end do end do ! THis should fail, because I have not set either mpiposix or mpiio. ret = nf90_create(FILE_NAME, nf90_netcdf4, ncid, & comm = MPI_COMM_WORLD, info = MPI_INFO_NULL, cache_size = CACHE_SIZE, & cache_nelems = CACHE_NELEMS, cache_preemption = CACHE_PREEMPTION) if (ret /= nf90_einval) stop 8 ! Create the netCDF file. call check(nf90_create(FILE_NAME, IOR(nf90_netcdf4, nf90_mpiposix), ncid, & comm = MPI_COMM_WORLD, info = MPI_INFO_NULL, cache_size = CACHE_SIZE, & cache_nelems = CACHE_NELEMS, cache_preemption = CACHE_PREEMPTION)) ! Define the dimensions. call check(nf90_def_dim(ncid, "x", NX, x_dimid)) call check(nf90_def_dim(ncid, "y", NY, y_dimid)) dimids = (/ y_dimid, x_dimid /) ! Define the variables. do v = 1, NUM_VARS call check(nf90_def_var(ncid, var_name(v), var_type(v), dimids, varid(v))) end do ! This will be the last collective operation. call check(nf90_enddef(ncid)) ! Determine what part of the variable will be written/read for this ! processor. It's a checkerboard decomposition. count = (/ HALF_NX, HALF_NY /) if (my_rank .eq. 0) then start = (/ 1, 1 /) else if (my_rank .eq. 1) then start = (/ HALF_NX + 1, 1 /) else if (my_rank .eq. 2) then start = (/ 1, HALF_NY + 1 /) else if (my_rank .eq. 3) then start = (/ HALF_NX + 1, HALF_NY + 1 /) endif ! Write this processor's data, except for processor zero. if (my_rank .ne. 0) then call check(nf90_put_var(ncid, varid(1), byte_out, start = start, count = count)) call check(nf90_put_var(ncid, varid(2), short_out, start = start, count = count)) call check(nf90_put_var(ncid, varid(3), int_out, start = start, count = count)) call check(nf90_put_var(ncid, varid(4), areal_out, start = start, count = count)) call check(nf90_put_var(ncid, varid(5), double_out, start = start, count = count)) call check(nf90_put_var(ncid, varid(6), ubyte_out, start = start, count = count)) call check(nf90_put_var(ncid, varid(7), ushort_out, start = start, count = count)) call check(nf90_put_var(ncid, varid(8), uint_out, start = start, count = count)) endif ! Close the file. call check(nf90_close(ncid)) ! Reopen the file. call check(nf90_open(FILE_NAME, IOR(nf90_nowrite, nf90_mpiio), ncid, & comm = MPI_COMM_WORLD, info = MPI_INFO_NULL)) ! Check some stuff out. call check(nf90_inquire(ncid, ndims, nvars, ngatts, unlimdimid, file_format)) if (ndims /= 2 .or. nvars /= NUM_VARS .or. ngatts /= 0 .or. unlimdimid /= -1 .or. & file_format /= nf90_format_netcdf4) stop 2 ! Read this processor's data. call check(nf90_get_var(ncid, varid(1), byte_in, start = start, count = count)) call check(nf90_get_var(ncid, varid(2), short_in, start = start, count = count)) call check(nf90_get_var(ncid, varid(3), int_in, start = start, count = count)) call check(nf90_get_var(ncid, varid(4), areal_in, start = start, count = count)) call check(nf90_get_var(ncid, varid(5), double_in, start = start, count = count)) call check(nf90_get_var(ncid, varid(6), ubyte_in, start = start, count = count)) call check(nf90_get_var(ncid, varid(7), ushort_in, start = start, count = count)) call check(nf90_get_var(ncid, varid(8), uint_in, start = start, count = count)) ! Check the data. All the data from the processor zero are fill ! value. do x = 1, HALF_NX do y = 1, HALF_NY if (my_rank .eq. 0) then if (byte_in(y, x) .ne. nf90_fill_byte) stop 3 if (short_in(y, x) .ne. nf90_fill_short) stop 4 if (int_in(y, x) .ne. nf90_fill_int) stop 5 if (areal_in(y, x) .ne. nf90_fill_real) stop 6 if (double_in(y, x) .ne. nf90_fill_double) stop 7 if (ubyte_in(y, x) .ne. nf90_fill_ubyte) stop 8 if (ushort_in(y, x) .ne. nf90_fill_ushort) stop 9 if (uint_in(y, x) .ne. nf90_fill_uint) stop 10 else if (byte_in(y, x) .ne. (my_rank * (-1))) stop 13 if (short_in(y, x) .ne. (my_rank * (-2))) stop 14 if (int_in(y, x) .ne. (my_rank * (-4))) stop 15 if (areal_in(y, x) .ne. (my_rank * (2.5))) stop 16 if (double_in(y, x) .ne. (my_rank * (-4.5))) stop 17 if (ubyte_in(y, x) .ne. (my_rank * (1))) stop 18 if (ushort_in(y, x) .ne. (my_rank * (2))) stop 19 if (uint_in(y, x) .ne. (my_rank * (4))) stop 20 endif end do end do ! Close the file. call check(nf90_close(ncid)) call MPI_Finalize(ierr) if (my_rank .eq. 0) print *,'*** SUCCESS!' contains ! This subroutine handles errors by printing an error message and ! exiting with a non-zero status. subroutine check(errcode) use netcdf implicit none integer, intent(in) :: errcode if(errcode /= nf90_noerr) then print *, 'Error: ', trim(nf90_strerror(errcode)) stop 99 endif end subroutine check end program f90tst_parallel3