Deltares, DELWAQ Version 5.06.00.7835M, Nov 28 2017, 13:31:32 Execution start: 2017/12/04 11:55:35 Number of active (transported) constituents : 3 Number of inactive (not transported) constituents : 0 Total number of constituents : 3 Number (in)active name 1 active Salinity 2 active IM1 3 active EColi WARNING reading element ITEM_SN Apparently this processes definition file has not been adapted for NetCDF Ignoring standard names and units NetCDF Using process definition file : proc_def.dat Version number : 5.06 Serial : 2017030901 # scanning input for old process definitions found only_active constant only activated processes are switched on total number of substances with fractions : 0 # Determining which processes can be switched on Input for [DynDepth ] dynamic calculation of the depth [Volume ] volume of computational cell Using DELWAQ volume [Surf ] horizontal surface area of a DELWAQ segment Using segment function nr 1 Process is activated Input for [TotDepth ] depth water column [Depth ] depth of segment Using output from proces [DynDepth ] [Surf ] horizontal surface area of a DELWAQ segment Using segment function nr 1 Process is activated Input for [Salinchlor ] Conversion of salinity into chloride or vv [Salinity ] Salinity Using substance nr 1 [Cl ] Chloride Using output from proces [Salinchlor ] [GtCl ] Salinity:Chloride ratio in sea water can use default value [Temp ] ambient water temperature Using constant nr 2 with value: 15.0000 [Sal0 ] salinity at zero chloride concentration can use default value [SWSalCl ] option: 0.0 salinity simulated, 1.0 Cl simultated can use default value Process is activated Input for [Extinc_VLG ] Extinction of visible-light (370-680nm) DLWQ-G [ExtVlIM1 ] VL specific extinction coefficient IM1 can use default value [ExtVlIM2 ] VL specific extinction coefficient IM2 can use default value [ExtVlIM3 ] VL specific extinction coefficient IM3 can use default value [ExtVlPOC1 ] VL specific extinction coefficient POC1 can use default value [ExtVlBak ] background extinction visible light can use default value [ExtVlPhyt ] VL extinction by phytoplankton can use default value [ExtVlMacro ] VL extinction by macrophytes can use default value [IM1 ] inorganic matter (IM1) Using substance nr 2 [IM2 ] inorganic matter (IM2) can use default value [IM3 ] inorganic matter (IM3) can use default value [POC1 ] POC1 (fast decomposing fraction) can use default value [POC2 ] POC2 (medium decomposing fraction) can use default value [SW_Uitz ] Extinction by Uitzicht On (1) or Off (0) can use default value [DOC ] Dissolved Organic Carbon (DOC) can use default value [ExtVlDOC ] VL specific extinction coefficient DOC can use default value [UitZDEPT1 ] Z1 (depth) can use default value [UitZDEPT2 ] Z2 (depth) can use default value [UitZCORCH ] CORa correction factor can use default value [UitZC_DET ] C3 coeff. absorption ash weight & detritus can use default value [UitZC_GL1 ] C1 coeff. absorption ash weight & detritus can use default value [UitZC_GL2 ] C2 coeff. absorption ash weight & detritus can use default value [UitZHELHM ] Hel_h constant can use default value [UitZTAU ] Tau constant calculation transparency can use default value [UitZangle ] Angle of incidence solar radiation can use default value [DMCFDetC ] DM:C ratio DetC can use default value [ExtVLSal0 ] extra VL extinction at Salinity = 0 can use default value [Salinity ] Salinity Using substance nr 1 [SalExt0 ] salinity value for extra extinction = 0 can use default value [ExtVlPOC2 ] VL specific extinction coefficient POC2 can use default value [ExtVlPOC3 ] VL specific extinction coefficient POC3 can use default value [ExtVlPOC4 ] VL specific extinction coefficient POC4 can use default value [POC3 ] POC3 (slow decomposing fraction) can use default value [POC4 ] POC4 (particulate refractory fraction) can use default value Process is activated Input for [Extinc_UVG ] Extinction of ultraviolet-light (350-480nm) DLWQ-G [ExtUvIM1 ] UV specific extinction coefficent IM1 Using constant nr 5 with value: 0.100000E-01 [ExtUvIM2 ] UV specific extinction coefficent IM2 can use default value [ExtUvIM3 ] UV specific extinction coefficent IM3 can use default value [ExtUVPOC1 ] UV specific extinction coefficient POC1 can use default value [ExtUvBak ] background extinction UV light Using constant nr 6 with value: 0.800000E-01 [ExtUvPhyt ] UV extinction by phytoplankton can use default value [ExtUvMacro ] UV extinction by macrophytes can use default value [IM1 ] inorganic matter (IM1) Using substance nr 2 [IM2 ] inorganic matter (IM2) can use default value [IM3 ] inorganic matter (IM3) can use default value [POC1 ] POC1 (fast decomposing fraction) can use default value [POC2 ] POC2 (medium decomposing fraction) can use default value [SW_Uitz ] Extinction by Uitzicht On (1) or Off (0) can use default value [DOC ] Dissolved Organic Carbon (DOC) can use default value [ExtUVDOC ] UV specific extinction coefficient DOC can use default value [UitZDEPT1 ] Z1 (depth) can use default value [UitZDEPT2 ] Z2 (depth) can use default value [UitZCORCH ] CORa correction factor can use default value [UitZC_DET ] C3 coeff. absorption ash weight & detritus can use default value [UitZC_GL1 ] C1 coeff. absorption ash weight & detritus can use default value [UitZC_GL2 ] C2 coeff. absorption ash weight & detritus can use default value [UitZHELHM ] Hel_h constant can use default value [UitZTAU ] Tau constant calculation transparency can use default value [UitZangle ] Angle of incidence solar radiation can use default value [DMCFDetC ] DM:C ratio DetC can use default value [ExtUVSal0 ] extra UV extinction at Salinity = 0 can use default value [Salinity ] Salinity Using substance nr 1 [SalExt0 ] salinity value for extra extinction = 0 can use default value [ExtUVPOC2 ] UV specific extinction coefficient POC2 can use default value [ExtUVPOC3 ] UV specific extinction coefficient POC3 can use default value [ExtUVPOC4 ] UV specific extinction coefficient POC4 can use default value [POC3 ] POC3 (slow decomposing fraction) can use default value [POC4 ] POC4 (particulate refractory fraction) can use default value Process is activated Input for [CalcRadUV ] UV-Radiation at segment upper and lower boundaries [ExtUv ] total extinction coefficient UV light Using output from proces [Extinc_UVG ] [Depth ] depth of segment Using output from proces [DynDepth ] [RadSurf ] irradiation at the water surface Using constant nr 4 with value: 100.000 [a_enh ] enhancement factor in radiation calculation can use default value [Surf ] horizontal surface area of a DELWAQ segment Using segment function nr 1 [SwEmersion ] switch indicating submersion(0) or emersion(1) can use default value [RadBot_uv ] UV-irradiation at the segment lower-boundary Using output from proces [CalcRadUV ] [fRefl ] fraction of radiation reflected at water surface can use default value Process is activated Input for [EColiMrt ] Mortality EColi bacteria [EColi ] E. Coli bacteria Using substance nr 3 [RcMrtEColi ] first-order mortality rate EColi Using constant nr 1 with value: 0.800000 [TcMrtEColi ] temperature coefficient for mortality EColi can use default value [Temp ] ambient water temperature Using constant nr 2 with value: 15.0000 [CTMrtEColi ] critical temperature for mortality EColi can use default value [Cl ] Chloride Using output from proces [Salinchlor ] [Rad_uv ] UV-irradiation at the segment upper-boundary Using output from proces [CalcRadUV ] [CFRAD ] conversion factor RAD to mortality rate can use default value [DayL ] daylength <0-1> Using constant nr 3 with value: 0.580000 [FrUvVL ] fraction UV light in visible light can use default value [ExtUv ] total extinction coefficient UV light Using output from proces [Extinc_UVG ] [Depth ] depth of segment Using output from proces [DynDepth ] [SpMrtEColi ] chloride enhanced mortality rate EColi can use default value Process is activated Input for [Secchi ] Secchi depth for visible-light (370-680nm) [ExtVl ] total extinction coefficient visible light Using output from proces [Extinc_VLG ] [IM1 ] inorganic matter (IM1) Using substance nr 2 [IM2 ] inorganic matter (IM2) can use default value [IM3 ] inorganic matter (IM3) can use default value [POC1 ] POC1 (fast decomposing fraction) can use default value [POC2 ] POC2 (medium decomposing fraction) can use default value [POC3 ] POC3 (slow decomposing fraction) can use default value [POC4 ] POC4 (particulate refractory fraction) can use default value [ExtVlODS ] VL extinction by DOC Using output from proces [Extinc_VLG ] [Chlfa ] Chlorophyll-a concentration can use default value [SW_Uitz ] Extinction by Uitzicht On (1) or Off (0) can use default value [UitZDEPT1 ] Z1 (depth) can use default value [UitZDEPT2 ] Z2 (depth) can use default value [UitZCORCH ] CORa correction factor can use default value [UitZC_DET ] C3 coeff. absorption ash weight & detritus can use default value [UitZC_GL1 ] C1 coeff. absorption ash weight & detritus can use default value [UitZC_GL2 ] C2 coeff. absorption ash weight & detritus can use default value [UitZHELHM ] Hel_h constant can use default value [UitZTAU ] Tau constant calculation transparency can use default value [UitZangle ] Angle of incidence solar radiation can use default value [DMCFDetC ] DM:C ratio DetC can use default value [PAConstant ] Poole-Atkins constant can use default value Process is activated # determinig the processes to model the substances. -fluxes for [Salinity ] no fluxes found -dispersion for [Salinity ] no dispersions found -velocity for [Salinity ] no velocity found -fluxes for [IM1 ] no fluxes found -dispersion for [IM1 ] no dispersions found -velocity for [IM1 ] no velocity found -fluxes for [EColi ] found flux [dMrtEColi ] mortality flux EColi from proces [EColiMrt ] Mortality EColi bacteria process is switched on. -dispersion for [EColi ] no dispersions found -velocity for [EColi ] no velocity found # locating processes for requested output # determining the input for the processes (in reversed order) Input for [Secchi ] Secchi depth for visible-light (370-680nm) [ExtVl ] total extinction coefficient visible light Using output from proces [Extinc_VLG ] [IM1 ] inorganic matter (IM1) Using substance nr 2 [IM2 ] inorganic matter (IM2) using default value: 0.00000 [IM3 ] inorganic matter (IM3) using default value: 0.00000 [POC1 ] POC1 (fast decomposing fraction) using default value: 0.00000 [POC2 ] POC2 (medium decomposing fraction) using default value: 0.00000 [POC3 ] POC3 (slow decomposing fraction) using default value: 0.00000 [POC4 ] POC4 (particulate refractory fraction) using default value: 0.00000 [ExtVlODS ] VL extinction by DOC Using output from proces [Extinc_VLG ] [Chlfa ] Chlorophyll-a concentration using default value: 0.00000 [SW_Uitz ] Extinction by Uitzicht On (1) or Off (0) using default value: 0.00000 [UitZDEPT1 ] Z1 (depth) using default value: 1.20000 [UitZDEPT2 ] Z2 (depth) using default value: 1.00000 [UitZCORCH ] CORa correction factor using default value: 2.50000 [UitZC_DET ] C3 coeff. absorption ash weight & detritus using default value: 0.260000E-01 [UitZC_GL1 ] C1 coeff. absorption ash weight & detritus using default value: 0.730000 [UitZC_GL2 ] C2 coeff. absorption ash weight & detritus using default value: 1.00000 [UitZHELHM ] Hel_h constant using default value: 0.140000E-01 [UitZTAU ] Tau constant calculation transparency using default value: 7.80000 [UitZangle ] Angle of incidence solar radiation using default value: 30.0000 [DMCFDetC ] DM:C ratio DetC using default value: 2.50000 [PAConstant ] Poole-Atkins constant using default value: 1.70000 Input for [EColiMrt ] Mortality EColi bacteria [EColi ] E. Coli bacteria Using substance nr 3 [RcMrtEColi ] first-order mortality rate EColi Using constant nr 1 with value: 0.800000 [TcMrtEColi ] temperature coefficient for mortality EColi using default value: 1.07000 [Temp ] ambient water temperature Using constant nr 2 with value: 15.0000 [CTMrtEColi ] critical temperature for mortality EColi using default value: 2.00000 [Cl ] Chloride Using output from proces [Salinchlor ] [Rad_uv ] UV-irradiation at the segment upper-boundary Using output from proces [CalcRadUV ] [CFRAD ] conversion factor RAD to mortality rate using default value: 0.860000E-01 [DayL ] daylength <0-1> Using constant nr 3 with value: 0.580000 [FrUvVL ] fraction UV light in visible light using default value: 0.120000 [ExtUv ] total extinction coefficient UV light Using output from proces [Extinc_UVG ] [Depth ] depth of segment Using output from proces [DynDepth ] [SpMrtEColi ] chloride enhanced mortality rate EColi using default value: 0.110000E-04 Input for [CalcRadUV ] UV-Radiation at segment upper and lower boundaries [ExtUv ] total extinction coefficient UV light Using output from proces [Extinc_UVG ] [Depth ] depth of segment Using output from proces [DynDepth ] [RadSurf ] irradiation at the water surface Using constant nr 4 with value: 100.000 [a_enh ] enhancement factor in radiation calculation using default value: 1.50000 [Surf ] horizontal surface area of a DELWAQ segment Using segment function nr 1 [SwEmersion ] switch indicating submersion(0) or emersion(1) using default value: 0.00000 [RadBot_uv ] UV-irradiation at the segment lower-boundary Using output from proces [CalcRadUV ] [fRefl ] fraction of radiation reflected at water surface using default value: 0.00000 Input for [Extinc_UVG ] Extinction of ultraviolet-light (350-480nm) DLWQ-G [ExtUvIM1 ] UV specific extinction coefficent IM1 Using constant nr 5 with value: 0.100000E-01 [ExtUvIM2 ] UV specific extinction coefficent IM2 using default value: 0.100000E-01 [ExtUvIM3 ] UV specific extinction coefficent IM3 using default value: 0.100000E-01 [ExtUVPOC1 ] UV specific extinction coefficient POC1 using default value: 0.100000 [ExtUvBak ] background extinction UV light Using constant nr 6 with value: 0.800000E-01 [ExtUvPhyt ] UV extinction by phytoplankton using default value: 0.00000 [ExtUvMacro ] UV extinction by macrophytes using default value: 0.00000 [IM1 ] inorganic matter (IM1) Using substance nr 2 [IM2 ] inorganic matter (IM2) using default value: 0.00000 [IM3 ] inorganic matter (IM3) using default value: 0.00000 [POC1 ] POC1 (fast decomposing fraction) using default value: 0.00000 [POC2 ] POC2 (medium decomposing fraction) using default value: 0.00000 [SW_Uitz ] Extinction by Uitzicht On (1) or Off (0) using default value: 0.00000 [DOC ] Dissolved Organic Carbon (DOC) using default value: 0.00000 [ExtUVDOC ] UV specific extinction coefficient DOC using default value: 0.00000 [UitZDEPT1 ] Z1 (depth) using default value: 1.20000 [UitZDEPT2 ] Z2 (depth) using default value: 1.00000 [UitZCORCH ] CORa correction factor using default value: 2.50000 [UitZC_DET ] C3 coeff. absorption ash weight & detritus using default value: 0.260000E-01 [UitZC_GL1 ] C1 coeff. absorption ash weight & detritus using default value: 0.730000 [UitZC_GL2 ] C2 coeff. absorption ash weight & detritus using default value: 1.00000 [UitZHELHM ] Hel_h constant using default value: 0.140000E-01 [UitZTAU ] Tau constant calculation transparency using default value: 7.80000 [UitZangle ] Angle of incidence solar radiation using default value: 30.0000 [DMCFDetC ] DM:C ratio DetC using default value: 2.50000 [ExtUVSal0 ] extra UV extinction at Salinity = 0 using default value: 0.00000 [Salinity ] Salinity Using substance nr 1 [SalExt0 ] salinity value for extra extinction = 0 using default value: 34.9200 [ExtUVPOC2 ] UV specific extinction coefficient POC2 using default value: 0.100000 [ExtUVPOC3 ] UV specific extinction coefficient POC3 using default value: 0.100000 [ExtUVPOC4 ] UV specific extinction coefficient POC4 using default value: 0.100000 [POC3 ] POC3 (slow decomposing fraction) using default value: 0.00000 [POC4 ] POC4 (particulate refractory fraction) using default value: 0.00000 Input for [Extinc_VLG ] Extinction of visible-light (370-680nm) DLWQ-G [ExtVlIM1 ] VL specific extinction coefficient IM1 using default value: 0.100000E-01 [ExtVlIM2 ] VL specific extinction coefficient IM2 using default value: 0.100000E-01 [ExtVlIM3 ] VL specific extinction coefficient IM3 using default value: 0.100000E-01 [ExtVlPOC1 ] VL specific extinction coefficient POC1 using default value: 0.100000 [ExtVlBak ] background extinction visible light using default value: 0.800000E-01 [ExtVlPhyt ] VL extinction by phytoplankton using default value: 0.00000 [ExtVlMacro ] VL extinction by macrophytes using default value: 0.00000 [IM1 ] inorganic matter (IM1) Using substance nr 2 [IM2 ] inorganic matter (IM2) using default value: 0.00000 [IM3 ] inorganic matter (IM3) using default value: 0.00000 [POC1 ] POC1 (fast decomposing fraction) using default value: 0.00000 [POC2 ] POC2 (medium decomposing fraction) using default value: 0.00000 [SW_Uitz ] Extinction by Uitzicht On (1) or Off (0) using default value: 0.00000 [DOC ] Dissolved Organic Carbon (DOC) using default value: 0.00000 [ExtVlDOC ] VL specific extinction coefficient DOC using default value: 0.00000 [UitZDEPT1 ] Z1 (depth) using default value: 1.20000 [UitZDEPT2 ] Z2 (depth) using default value: 1.00000 [UitZCORCH ] CORa correction factor using default value: 2.50000 [UitZC_DET ] C3 coeff. absorption ash weight & detritus using default value: 0.260000E-01 [UitZC_GL1 ] C1 coeff. absorption ash weight & detritus using default value: 0.730000 [UitZC_GL2 ] C2 coeff. absorption ash weight & detritus using default value: 1.00000 [UitZHELHM ] Hel_h constant using default value: 0.140000E-01 [UitZTAU ] Tau constant calculation transparency using default value: 7.80000 [UitZangle ] Angle of incidence solar radiation using default value: 30.0000 [DMCFDetC ] DM:C ratio DetC using default value: 2.50000 [ExtVLSal0 ] extra VL extinction at Salinity = 0 using default value: 0.00000 [Salinity ] Salinity Using substance nr 1 [SalExt0 ] salinity value for extra extinction = 0 using default value: 34.9200 [ExtVlPOC2 ] VL specific extinction coefficient POC2 using default value: 0.100000 [ExtVlPOC3 ] VL specific extinction coefficient POC3 using default value: 0.100000 [ExtVlPOC4 ] VL specific extinction coefficient POC4 using default value: 0.100000 [POC3 ] POC3 (slow decomposing fraction) using default value: 0.00000 [POC4 ] POC4 (particulate refractory fraction) using default value: 0.00000 Input for [Salinchlor ] Conversion of salinity into chloride or vv [Salinity ] Salinity Using substance nr 1 [Cl ] Chloride Using output from proces [Salinchlor ] [GtCl ] Salinity:Chloride ratio in sea water using default value: 1.80500 [Temp ] ambient water temperature Using constant nr 2 with value: 15.0000 [Sal0 ] salinity at zero chloride concentration using default value: 0.300000E-01 [SWSalCl ] option: 0.0 salinity simulated, 1.0 Cl simultated using default value: 0.00000 Input for [TotDepth ] depth water column [Depth ] depth of segment Using output from proces [DynDepth ] [Surf ] horizontal surface area of a DELWAQ segment Using segment function nr 1 Input for [DynDepth ] dynamic calculation of the depth [Volume ] volume of computational cell Using DELWAQ volume [Surf ] horizontal surface area of a DELWAQ segment Using segment function nr 1 # determining the use of the delwaq input info: segment function [bottomdept] is not used by the proces system # locating requested output from active processes output [ExtUv ] from proces [Extinc_UVG] output [MrtToEColi ] from proces [EColiMrt ]